Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
1431 |
PTEN |
rs587780007 |
SNP |
missense variant |
S/N |
114 |
201 |
0.2 |
20 |
benign |
0.019 |
22001 |
likely benign |
22 |
1432 |
PTEN |
rs587780007 |
SNP |
missense variant |
S/I |
114 |
21 |
0.02 |
137 |
benign |
0.136 |
24001 |
likely benign |
24 |
1433 |
PTEN |
rs876658345 |
SNP |
missense variant |
S/R |
114 |
111 |
0.11 |
20 |
benign |
0.019 |
21001 |
likely benign |
21 |
1434 |
PTEN |
rs786203858 |
SNP |
missense variant |
I/V |
115 |
591 |
0.59 |
1 |
benign |
0 |
19001 |
likely benign |
19 |
1435 |
PTEN |
rs746930141 |
SNP |
missense variant |
E/Q |
116 |
391 |
0.39 |
50 |
benign |
0.049 |
22001 |
likely benign |
22 |
1436 |
PTEN |
rs1197734477 |
SNP |
missense variant |
E/G |
116 |
301 |
0.3 |
13 |
benign |
0.012 |
22001 |
likely benign |
22 |
1437 |
PTEN |
rs1064794436 |
SNP |
missense variant |
R/C |
117 |
121 |
0.12 |
6 |
benign |
0.005 |
23001 |
likely benign |
23 |
1438 |
PTEN |
rs786201507 |
SNP |
missense variant |
R/H |
117 |
161 |
0.16 |
6 |
benign |
0.005 |
23001 |
likely benign |
23 |
1439 |
PTEN |
rs1564568473 |
SNP |
missense variant |
D/G |
119 |
111 |
0.11 |
31 |
benign |
0.03 |
24001 |
likely benign |
24 |
1440 |
PTEN |
rs878853946 |
SNP |
missense variant |
D/N |
121 |
131 |
0.13 |
895 |
possibly damaging |
0.894 |
23001 |
likely benign |
23 |