Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
16371 |
PIK3R1 |
rs757620613 |
SNP |
missense variant |
I/M |
182 |
51 |
0.05 |
55 |
benign |
0.054 |
22001 |
likely benign |
22 |
16372 |
PIK3R1 |
rs1299498656 |
SNP |
missense variant |
K/E |
186 |
71 |
0.07 |
18 |
benign |
0.017 |
23001 |
likely benign |
23 |
16373 |
EGFR |
rs767259994 |
SNP |
missense variant |
N/S |
3 |
881 |
0.88 |
1 |
benign |
0 |
18001 |
likely benign |
18 |
16374 |
EGFR |
rs1562752927 |
SNP |
missense variant |
N/K |
4 |
31 |
0.03 |
63 |
benign |
0.062 |
22001 |
likely benign |
22 |
16375 |
EGFR |
rs760228905 |
SNP |
missense variant |
E/K |
6 |
11 |
0.01 |
744 |
possibly damaging |
0.743 |
25001 |
likely benign |
25 |
16376 |
EGFR |
rs763572530 |
SNP |
missense variant |
E/A |
6 |
11 |
0.01 |
973 |
probably damaging |
0.972 |
26001 |
likely benign |
26 |
16377 |
EGFR |
rs369580836 |
SNP |
missense variant |
Q/P |
18 |
521 |
0.52 |
12 |
benign |
0.011 |
20001 |
likely benign |
20 |
16378 |
EGFR |
rs369580836 |
SNP |
missense variant |
Q/R |
18 |
221 |
0.22 |
276 |
benign |
0.275 |
21001 |
likely benign |
21 |
16379 |
EGFR |
rs1269583681 |
SNP |
missense variant |
N/K |
20 |
81 |
0.08 |
93 |
benign |
0.092 |
10001 |
likely benign |
10 |
16380 |
EGFR |
rs778638117 |
SNP |
missense variant |
L/I |
23 |
11 |
0.01 |
831 |
possibly damaging |
0.83 |
25001 |
likely benign |
25 |