Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
17001 |
FOXA1 |
rs1401881303 |
SNP |
missense variant |
S/L |
307 |
51 |
0.05 |
59 |
benign |
0.058 |
22001 |
likely benign |
22 |
17002 |
FOXA1 |
rs764636331 |
SNP |
missense variant |
S/R |
304 |
71 |
0.07 |
114 |
benign |
0.113 |
15001 |
likely benign |
15 |
17003 |
FOXA1 |
rs1183289159 |
SNP |
missense variant |
S/G |
304 |
321 |
0.32 |
1 |
benign |
0 |
13001 |
likely benign |
13 |
17004 |
FOXA1 |
rs997215836 |
SNP |
missense variant |
P/L |
303 |
21 |
0.02 |
1 |
benign |
0 |
21001 |
likely benign |
21 |
17005 |
FOXA1 |
rs997215836 |
SNP |
missense variant |
P/H |
303 |
41 |
0.04 |
95 |
benign |
0.094 |
21001 |
likely benign |
21 |
17006 |
FOXA1 |
rs753453381 |
SNP |
missense variant |
S/T |
301 |
261 |
0.26 |
4 |
benign |
0.003 |
5001 |
likely benign |
5 |
17007 |
FOXA1 |
rs1293965921 |
SNP |
missense variant |
A/T |
300 |
391 |
0.39 |
1 |
benign |
0 |
3001 |
likely benign |
3 |
17008 |
FOXA1 |
rs577631417 |
SNP |
missense variant |
P/L |
297 |
171 |
0.17 |
6 |
benign |
0.005 |
22001 |
likely benign |
22 |
17009 |
FOXA1 |
rs577631417 |
SNP |
missense variant |
P/H |
297 |
101 |
0.1 |
636 |
possibly damaging |
0.635 |
23001 |
likely benign |
23 |
17010 |
FOXA1 |
rs1231726284 |
SNP |
missense variant |
P/S |
297 |
531 |
0.53 |
87 |
benign |
0.086 |
21001 |
likely benign |
21 |