Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
19301 |
SETD2 |
rs6767907 |
SNP |
missense variant |
N/K |
1027 |
71 |
0.07 |
72 |
benign |
0.071 |
18001 |
likely benign |
18 |
19302 |
SETD2 |
rs777213195 |
SNP |
missense variant |
D/G |
1026 |
21 |
0.02 |
687 |
possibly damaging |
0.686 |
23001 |
likely benign |
23 |
19303 |
SETD2 |
rs1417600727 |
SNP |
missense variant |
I/M |
1025 |
461 |
0.46 |
10 |
benign |
0.009 |
13001 |
likely benign |
13 |
19304 |
SETD2 |
rs200491606 |
SNP |
missense variant |
I/R |
1025 |
291 |
0.29 |
302 |
benign |
0.301 |
19001 |
likely benign |
19 |
19305 |
SETD2 |
rs200491606 |
SNP |
missense variant |
I/T |
1025 |
611 |
0.61 |
6 |
benign |
0.005 |
13001 |
likely benign |
13 |
19306 |
SETD2 |
rs757222335 |
SNP |
missense variant |
S/N |
1021 |
181 |
0.18 |
25 |
benign |
0.024 |
9001 |
likely benign |
9 |
19307 |
SETD2 |
rs141227139 |
SNP |
missense variant |
S/F |
1020 |
731 |
0.73 |
2 |
benign |
0.001 |
14001 |
likely benign |
14 |
19308 |
SETD2 |
rs115323681 |
SNP |
missense variant |
Q/R |
1019 |
81 |
0.08 |
576 |
possibly damaging |
0.575 |
21001 |
likely benign |
21 |
19309 |
SETD2 |
rs1191319440 |
SNP |
missense variant |
T/I |
1018 |
141 |
0.14 |
8 |
benign |
0.007 |
15001 |
likely benign |
15 |
19310 |
SETD2 |
rs771866928 |
SNP |
missense variant |
S/F |
1016 |
1 |
0 |
938 |
probably damaging |
0.937 |
22001 |
likely benign |
22 |