Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
19971 |
SETD2 |
rs1480415679 |
SNP |
missense variant |
S/F |
132 |
141 |
0.14 |
161 |
benign |
0.16 |
22001 |
likely benign |
22 |
19972 |
SETD2 |
rs750623264 |
SNP |
missense variant |
I/V |
131 |
1001 |
1 |
2 |
benign |
0.001 |
3001 |
likely benign |
3 |
19973 |
SETD2 |
rs1378977369 |
SNP |
missense variant |
T/I |
130 |
591 |
0.59 |
6 |
benign |
0.005 |
6001 |
likely benign |
6 |
19974 |
SETD2 |
rs1308113254 |
SNP |
missense variant |
T/A |
130 |
1001 |
1 |
6 |
benign |
0.005 |
1 |
likely benign |
0 |
19975 |
SETD2 |
rs1229892824 |
SNP |
missense variant |
Q/R |
128 |
51 |
0.05 |
31 |
benign |
0.03 |
18001 |
likely benign |
18 |
19976 |
SETD2 |
rs1559749871 |
SNP |
missense variant |
T/S |
126 |
141 |
0.14 |
21 |
benign |
0.02 |
12001 |
likely benign |
12 |
19977 |
SETD2 |
rs1040670872 |
SNP |
missense variant |
A/G |
124 |
331 |
0.33 |
6 |
benign |
0.005 |
5001 |
likely benign |
5 |
19978 |
SETD2 |
rs1445256311 |
SNP |
missense variant |
A/T |
124 |
481 |
0.48 |
97 |
benign |
0.096 |
12001 |
likely benign |
12 |
19979 |
SETD2 |
rs1162661952 |
SNP |
missense variant |
S/F |
121 |
1 |
0 |
936 |
probably damaging |
0.935 |
22001 |
likely benign |
22 |
19980 |
SETD2 |
rs1404541560 |
SNP |
missense variant |
S/P |
121 |
81 |
0.08 |
74 |
benign |
0.073 |
18001 |
likely benign |
18 |