Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
2781 |
GATA3 |
rs1164091515 |
SNP |
missense variant |
V/A |
72 |
751 |
0.75 |
25 |
benign |
0.024 |
22001 |
likely benign |
22 |
2782 |
GATA3 |
rs755756354 |
SNP |
missense variant |
P/S |
76 |
701 |
0.7 |
187 |
benign |
0.186 |
22001 |
likely benign |
22 |
2783 |
GATA3 |
rs1315804209 |
SNP |
missense variant |
P/L |
76 |
31 |
0.03 |
503 |
possibly damaging |
0.502 |
24001 |
likely benign |
24 |
2784 |
GATA3 |
rs1325423656 |
SNP |
missense variant |
P/S |
77 |
291 |
0.29 |
11 |
benign |
0.01 |
22001 |
likely benign |
22 |
2785 |
GATA3 |
rs1343882720 |
SNP |
missense variant |
P/L |
77 |
21 |
0.02 |
16 |
benign |
0.015 |
24001 |
likely benign |
24 |
2786 |
GATA3 |
rs1004765920 |
SNP |
missense variant |
T/N |
78 |
291 |
0.29 |
1 |
benign |
0 |
22001 |
likely benign |
22 |
2787 |
GATA3 |
rs1004765920 |
SNP |
missense variant |
T/I |
78 |
181 |
0.18 |
10 |
benign |
0.009 |
22001 |
likely benign |
22 |
2788 |
GATA3 |
rs759839816 |
SNP |
missense variant |
G/R |
81 |
11 |
0.01 |
178 |
benign |
0.177 |
27001 |
likely benign |
27 |
2789 |
GATA3 |
rs1460926411 |
SNP |
missense variant |
G/E |
81 |
21 |
0.02 |
81 |
benign |
0.08 |
15001 |
likely benign |
15 |
2790 |
GATA3 |
rs764989707 |
SNP |
missense variant |
S/G |
82 |
391 |
0.39 |
1 |
benign |
0 |
22001 |
likely benign |
22 |