Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
27891 |
PDGFFRA |
rs764472307 |
SNP |
missense variant |
A/E |
7 |
251 |
0.25 |
39 |
benign |
0.038 |
3001 |
likely benign |
3 |
27892 |
PDGFFRA |
rs764472307 |
SNP |
missense variant |
A/V |
7 |
551 |
0.55 |
1 |
benign |
0 |
5001 |
likely benign |
5 |
27893 |
PDGFFRA |
rs1060501519 |
SNP |
missense variant |
V/I |
10 |
991 |
0.99 |
2 |
benign |
0.001 |
8001 |
likely benign |
8 |
27894 |
PDGFFRA |
rs781404006 |
SNP |
missense variant |
V/D |
10 |
1 |
0 |
468 |
possibly damaging |
0.467 |
23001 |
likely benign |
23 |
27895 |
PDGFFRA |
rs1440200916 |
SNP |
missense variant |
G/A |
12 |
521 |
0.52 |
24 |
benign |
0.023 |
16001 |
likely benign |
16 |
27896 |
PDGFFRA |
rs1440200916 |
SNP |
missense variant |
G/V |
12 |
301 |
0.3 |
4 |
benign |
0.003 |
21001 |
likely benign |
21 |
27897 |
PDGFFRA |
rs1227672940 |
SNP |
missense variant |
C/Y |
13 |
391 |
0.39 |
1 |
benign |
0 |
18001 |
likely benign |
18 |
27898 |
PDGFFRA |
rs1286350038 |
SNP |
missense variant |
L/P |
15 |
41 |
0.04 |
581 |
possibly damaging |
0.58 |
25001 |
likely benign |
25 |
27899 |
PDGFFRA |
rs587778596 |
SNP |
missense variant |
T/S |
16 |
341 |
0.34 |
2 |
benign |
0.001 |
11001 |
likely benign |
11 |
27900 |
PDGFFRA |
rs766600687 |
SNP |
missense variant |
G/V |
17 |
11 |
0.01 |
599 |
possibly damaging |
0.598 |
13001 |
likely benign |
13 |