Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
29531 |
PALB2 |
rs1555462067 |
SNP |
missense variant |
K/Q |
47 |
1 |
0 |
894 |
possibly damaging |
0.893 |
23001 |
likely benign |
23 |
29532 |
PALB2 |
rs756856792 |
SNP |
missense variant |
I/M |
46 |
11 |
0.01 |
312 |
benign |
0.311 |
12001 |
likely benign |
12 |
29533 |
PALB2 |
rs551111938 |
SNP |
missense variant |
K/N |
45 |
41 |
0.04 |
140 |
benign |
0.139 |
13001 |
likely benign |
13 |
29534 |
PALB2 |
rs765125459 |
SNP |
missense variant |
K/E |
45 |
1 |
0 |
726 |
possibly damaging |
0.725 |
24001 |
likely benign |
24 |
29535 |
PALB2 |
rs1064794085 |
substitution |
missense variant |
R/I |
42 |
1 |
0 |
274 |
benign |
0.273 |
22001 |
likely benign |
22 |
29536 |
PALB2 |
rs573118236 |
SNP |
missense variant |
R/K |
42 |
81 |
0.08 |
48 |
benign |
0.047 |
19001 |
likely benign |
19 |
29537 |
PALB2 |
rs1555462083 |
SNP |
missense variant |
Q/L |
41 |
1 |
0 |
867 |
possibly damaging |
0.866 |
23001 |
likely benign |
23 |
29538 |
PALB2 |
rs371875379 |
SNP |
missense variant |
A/V |
40 |
1 |
0 |
415 |
benign |
0.414 |
22001 |
likely benign |
22 |
29539 |
PALB2 |
rs371875379 |
SNP |
missense variant |
A/G |
40 |
11 |
0.01 |
972 |
probably damaging |
0.971 |
24001 |
likely benign |
24 |
29540 |
PALB2 |
rs202194596 |
SNP |
missense variant |
R/L |
39 |
1 |
0 |
980 |
probably damaging |
0.979 |
24001 |
likely benign |
24 |