Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
29821 |
SMAD4 |
rs1343555503 |
SNP |
missense variant |
S/N |
271 |
261 |
0.26 |
4 |
benign |
0.003 |
21001 |
likely benign |
21 |
29822 |
SMAD4 |
rs1282145977 |
SNP |
missense variant |
T/S |
273 |
101 |
0.1 |
7 |
benign |
0.006 |
17001 |
likely benign |
17 |
29823 |
SMAD4 |
rs751860447 |
SNP |
missense variant |
A/T |
274 |
61 |
0.06 |
8 |
benign |
0.007 |
22001 |
likely benign |
22 |
29824 |
SMAD4 |
rs1229812463 |
SNP |
missense variant |
Y/F |
276 |
301 |
0.3 |
424 |
benign |
0.423 |
22001 |
likely benign |
22 |
29825 |
SMAD4 |
rs1555685960 |
SNP |
missense variant |
T/A |
277 |
71 |
0.07 |
991 |
probably damaging |
0.99 |
21001 |
likely benign |
21 |
29826 |
SMAD4 |
rs1257577085 |
SNP |
missense variant |
P/T |
278 |
41 |
0.04 |
999 |
probably damaging |
0.998 |
21001 |
likely benign |
21 |
29827 |
SMAD4 |
rs1568206174 |
SNP |
missense variant |
P/L |
281 |
11 |
0.01 |
999 |
probably damaging |
0.998 |
22001 |
likely benign |
22 |
29828 |
SMAD4 |
rs1555685962 |
SNP |
missense variant |
H/P |
282 |
391 |
0.39 |
994 |
probably damaging |
0.993 |
22001 |
likely benign |
22 |
29829 |
SMAD4 |
rs750111831 |
SNP |
missense variant |
G/S |
286 |
11 |
0.01 |
1000 |
probably damaging |
0.999 |
23001 |
likely benign |
23 |
29830 |
SMAD4 |
rs1568206180 |
SNP |
missense variant |
H/R |
287 |
1001 |
1 |
984 |
probably damaging |
0.983 |
20001 |
likely benign |
20 |