Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
29831 |
SMAD4 |
rs1451329701 |
SNP |
missense variant |
Q/R |
289 |
191 |
0.19 |
975 |
probably damaging |
0.974 |
22001 |
likely benign |
22 |
29832 |
SMAD4 |
rs755770046 |
SNP |
missense variant |
H/P |
290 |
81 |
0.08 |
2 |
benign |
0.001 |
24001 |
likely benign |
24 |
29833 |
SMAD4 |
rs863224733 |
SNP |
missense variant |
H/Y |
291 |
11 |
0.01 |
424 |
benign |
0.423 |
23001 |
likely benign |
23 |
29834 |
SMAD4 |
rs779583608 |
SNP |
missense variant |
H/P |
291 |
21 |
0.02 |
2 |
benign |
0.001 |
24001 |
likely benign |
24 |
29835 |
SMAD4 |
rs786201404 |
SNP |
missense variant |
P/L |
292 |
11 |
0.01 |
304 |
benign |
0.303 |
21001 |
likely benign |
21 |
29836 |
SMAD4 |
rs1555685965 |
SNP |
missense variant |
P/S |
293 |
11 |
0.01 |
998 |
probably damaging |
0.997 |
23001 |
likely benign |
23 |
29837 |
SMAD4 |
rs7238500 |
SNP |
missense variant |
M/V |
294 |
151 |
0.15 |
20 |
benign |
0.019 |
17001 |
likely benign |
17 |
29838 |
SMAD4 |
rs1167543544 |
SNP |
missense variant |
P/A |
295 |
831 |
0.83 |
63 |
benign |
0.062 |
15001 |
likely benign |
15 |
29839 |
SMAD4 |
rs370176106 |
SNP |
missense variant |
P/Q |
295 |
311 |
0.31 |
16 |
benign |
0.015 |
19001 |
likely benign |
19 |
29840 |
SMAD4 |
rs370176106 |
SNP |
missense variant |
P/R |
295 |
201 |
0.2 |
306 |
benign |
0.305 |
20001 |
likely benign |
20 |