Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
29921 |
ATM |
rs587782239 |
SNP |
missense variant |
C/F |
44 |
11 |
0.01 |
86 |
benign |
0.085 |
22001 |
likely benign |
22 |
29922 |
ATM |
rs762304746 |
SNP |
missense variant |
R/Q |
46 |
91 |
0.09 |
853 |
possibly damaging |
0.852 |
18001 |
likely benign |
18 |
29923 |
ATM |
rs762304746 |
SNP |
missense variant |
R/P |
46 |
1 |
0 |
977 |
probably damaging |
0.976 |
22001 |
likely benign |
22 |
29924 |
ATM |
rs1060501567 |
SNP |
missense variant |
H/Y |
47 |
531 |
0.53 |
12 |
benign |
0.011 |
12001 |
likely benign |
12 |
29925 |
ATM |
rs967371351 |
SNP |
missense variant |
H/R |
47 |
201 |
0.2 |
284 |
benign |
0.283 |
15001 |
likely benign |
15 |
29926 |
ATM |
rs1237700879 |
SNP |
missense variant |
H/Q |
47 |
251 |
0.25 |
21 |
benign |
0.02 |
1 |
likely benign |
0 |
29927 |
ATM |
rs202028401 |
SNP |
missense variant |
F/Y |
48 |
1001 |
1 |
301 |
benign |
0.3 |
5001 |
likely benign |
5 |
29928 |
ATM |
rs202028401 |
SNP |
missense variant |
F/S |
48 |
581 |
0.58 |
7 |
benign |
0.006 |
11001 |
likely benign |
11 |
29929 |
ATM |
rs202028401 |
SNP |
missense variant |
F/C |
48 |
181 |
0.18 |
8 |
benign |
0.007 |
12001 |
likely benign |
12 |
29930 |
ATM |
rs751327903 |
SNP |
missense variant |
F/L |
48 |
741 |
0.74 |
4 |
benign |
0.003 |
5001 |
likely benign |
5 |