Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
54711 |
MSH2 |
rs779051492 |
SNP |
missense variant |
N/S |
242 |
11 |
0.01 |
277 |
benign |
0.276 |
|
|
|
54712 |
MSH2 |
rs138857091 |
SNP |
missense variant |
R/W |
243 |
1 |
0 |
999 |
probably damaging |
0.998 |
|
|
|
54713 |
MSH2 |
rs63751455 |
SNP |
missense variant |
R/Q |
243 |
21 |
0.02 |
922 |
probably damaging |
0.921 |
|
|
|
54714 |
MSH2 |
rs864622271 |
SNP |
missense variant |
L/F |
245 |
1 |
0 |
1001 |
probably damaging |
1 |
|
|
|
54715 |
MSH2 |
rs63750881 |
SNP |
missense variant |
K/Q |
246 |
31 |
0.03 |
32 |
benign |
0.031 |
|
|
|
54716 |
MSH2 |
MMR_c.736A>C |
SNP |
missense variant |
K/Q |
246 |
31 |
0.03 |
32 |
benign |
0.031 |
|
|
|
54717 |
MSH2 |
rs587779178 |
SNP |
missense variant |
K/E |
248 |
101 |
0.1 |
359 |
benign |
0.358 |
|
|
|
54718 |
MSH2 |
rs1064794704 |
sequence alteration |
missense variant |
K/R |
248 |
151 |
0.15 |
19 |
benign |
0.018 |
|
|
|
54719 |
MSH2 |
rs1060502022 |
SNP |
missense variant |
K/N |
248 |
11 |
0.01 |
734 |
possibly damaging |
0.733 |
|
|
|
54720 |
MSH2 |
rs61756464 |
SNP |
missense variant |
K/T |
249 |
11 |
0.01 |
983 |
probably damaging |
0.982 |
|
|
|