Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
54941 |
MSH2 |
rs876658240 |
SNP |
missense variant |
V/I |
435 |
381 |
0.38 |
2 |
benign |
0.001 |
|
|
|
54942 |
MSH2 |
rs773956144 |
SNP |
missense variant |
V/L |
437 |
441 |
0.44 |
18 |
benign |
0.017 |
|
|
|
54943 |
MSH2 |
rs773956144 |
SNP |
missense variant |
V/L |
437 |
441 |
0.44 |
18 |
benign |
0.017 |
|
|
|
54944 |
MSH2 |
rs786203116 |
SNP |
missense variant |
P/S |
439 |
41 |
0.04 |
1001 |
probably damaging |
1 |
|
|
|
54945 |
MSH2 |
rs771789692 |
SNP |
missense variant |
P/L |
439 |
1 |
0 |
1001 |
probably damaging |
1 |
|
|
|
54946 |
MSH2 |
rs587779082 |
sequence alteration |
missense variant |
PL/PF |
439 |
|
|
|
- |
|
|
|
|
54947 |
MSH2 |
rs587779084 |
SNP |
missense variant |
L/P |
440 |
1 |
0 |
952 |
probably damaging |
0.951 |
|
|
|
54948 |
MSH2 |
rs587779086 |
SNP |
missense variant |
T/P |
441 |
131 |
0.13 |
62 |
benign |
0.061 |
|
|
|
54949 |
MSH2 |
rs876659906 |
SNP |
missense variant |
L/I |
443 |
131 |
0.13 |
40 |
benign |
0.039 |
|
|
|
54950 |
MSH2 |
rs876659906 |
SNP |
missense variant |
L/V |
443 |
41 |
0.04 |
104 |
benign |
0.103 |
|
|
|