Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
54971 |
MSH2 |
rs587781997 |
SNP |
missense variant |
Q/H |
462 |
81 |
0.08 |
479 |
possibly damaging |
0.478 |
|
|
|
54972 |
MSH2 |
rs1064793825 |
sequence alteration |
missense variant |
V/M |
463 |
1 |
0 |
943 |
probably damaging |
0.942 |
|
|
|
54973 |
MSH2 |
rs750737783 |
SNP |
missense variant |
E/G |
464 |
21 |
0.02 |
62 |
benign |
0.061 |
|
|
|
54974 |
MSH2 |
rs876658457 |
SNP |
missense variant |
H/Y |
466 |
71 |
0.07 |
68 |
benign |
0.067 |
|
|
|
54975 |
MSH2 |
rs544265737 |
SNP |
missense variant |
H/R |
466 |
71 |
0.07 |
810 |
possibly damaging |
0.809 |
|
|
|
54976 |
MSH2 |
rs780702096 |
SNP |
missense variant |
L/V |
469 |
201 |
0.2 |
517 |
possibly damaging |
0.516 |
|
|
|
54977 |
MSH2 |
MMR_c.1409T>A |
SNP |
missense variant |
V/E |
470 |
1 |
0 |
726 |
possibly damaging |
0.725 |
|
|
|
54978 |
MSH2 |
rs267607959 |
SNP |
missense variant |
V/E |
470 |
1 |
0 |
726 |
possibly damaging |
0.725 |
|
|
|
54979 |
MSH2 |
rs267607959 |
SNP |
missense variant |
V/A |
470 |
1 |
0 |
502 |
possibly damaging |
0.501 |
|
|
|
54980 |
MSH2 |
rs745874745 |
SNP |
missense variant |
K/N |
471 |
91 |
0.09 |
984 |
probably damaging |
0.983 |
|
|
|