Database
BC-TFdb Transcription factors drivers in Breast Cancer Database
id |
TP53 |
VariantID |
Class |
ConseqType |
AA |
AAcoord |
sift_sort |
SIFT |
polyphen_sort |
polyphen_class |
PolyPhen |
cadd_sort |
cadd_class |
CADD |
63491 |
PMS2 |
rs138222146 |
SNP |
missense variant |
A/V |
539 |
291 |
0.29 |
1 |
benign |
0 |
|
|
|
63492 |
PMS2 |
rs138222146 |
SNP |
missense variant |
A/E |
539 |
1001 |
1 |
6 |
benign |
0.005 |
|
|
|
63493 |
PMS2 |
rs115052399 |
SNP |
missense variant |
E/K |
537 |
251 |
0.25 |
4 |
benign |
0.003 |
|
|
|
63494 |
PMS2 |
rs762579299 |
SNP |
missense variant |
S/Y |
535 |
111 |
0.11 |
76 |
benign |
0.075 |
|
|
|
63495 |
PMS2 |
rs876658794 |
SNP |
missense variant |
S/L |
529 |
91 |
0.09 |
63 |
benign |
0.062 |
|
|
|
63496 |
PMS2 |
rs756823316 |
SNP |
missense variant |
R/G |
527 |
391 |
0.39 |
1 |
benign |
0 |
|
|
|
63497 |
PMS2 |
rs63750236 |
SNP |
missense variant |
D/E |
526 |
481 |
0.48 |
13 |
benign |
0.012 |
|
|
|
63498 |
PMS2 |
rs63750236 |
SNP |
missense variant |
D/E |
526 |
481 |
0.48 |
13 |
benign |
0.012 |
|
|
|
63499 |
PMS2 |
rs143235330 |
SNP |
missense variant |
D/G |
526 |
41 |
0.04 |
446 |
benign |
0.445 |
|
|
|
63500 |
PMS2 |
rs63750686 |
SNP |
missense variant |
D/Y |
526 |
21 |
0.02 |
886 |
possibly damaging |
0.885 |
|
|
|